To cite package 'RZooRoH' in publications, please use:

T. Druet and M. Gautier (2017). A model-based approach to characterize individual inbreeding at both global and local genomic scales. Molecular Ecology, 26:5820-5841

A.R. Bertrand, N.K. Kadri, L. Flori, M. Gautier and T. Druet (2019). RZooRoH: an R package to characterize individual genomic autozygosity and identify homozygous-by-descent segments. Methods in Ecology and Evolution

T. Druet and M. Gautier (2022). A hidden Markov model to estimate homozygous-by-descent probabilities associated with nested layers of ancestors. Theor Popul Biol, 145:38-51

Corresponding BibTeX entries:

  @Article{,
    author = {Tom Druet and Mathieu Gautier},
    title = {A model-based approach to characterize individual
      inbreeding at both global and local genomic scales.},
    journal = {Molecular Ecology},
    year = {2017},
    volume = {26},
    number = {20},
    pages = {5820-5841},
  }

  @Article{,
    author = {Amandine Bertrand and Naveen Kadri and Laurence Flori and
      Mathieu Gautier and Tom Druet},
    title = {RZooRoH: an R package to characterize individual genomic
      autozygosity and identify homozygous-by-descent segments.},
    journal = {Methods in Ecology and Evolution},
    year = {2019},
  }

  @Article{,
    author = {Tom Druet and Mathieu Gautier},
    title = {A hidden Markov model to estimate homozygous-by-descent
      probabilities associated with nested layers of ancestors.},
    journal = {Theoretical Population Biology},
    year = {2022},
    volume = {145},
    pages = {38-51},
  }